genewise output Score 437.37 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000627_2.0 1 SQQTSQKKSKVPVQLDLGNMLAFLEQKQQSQKSKQDQRPVTLT +++ KKSKVPVQLD+GNMLA LE+KQQSQK KQD +PV L+ TEKAGGKKSKVPVQLDIGNMLAALEKKQQSQKPKQDTKPVILS OMLM01005182.1-42400 agagggaaaagcgccgagaatggcgaacctcacacgaacgact caacggaagatctatatgattcctaaaaacaacaaacactttc tagtttggcgtttggcaacggtcgaggggtaacggccgactca SPP00000627_2.0 44 GGALPVVHKEPSVQKKQ-WQQEK GG LPVV K+PS+QKK WQQ+K V:V[gtt] GGGLPVVQKQPSIQKKPPWQQDK OMLM01005182.1-42271 GGTAAGTA Intron 1 CAGTTgggccggcacctacaacctccga <1-----[42270:41868]-1> gggtcttaaacctaaaccgaaaa taatttcgagaatgggctggata SPP00000627_2.0 67 TPHNPLDSTCPSVKKGKQREVPKAKKPTPLKR----------------- HNPLDST P VKKGKQREVPKAKKPTPLK+ IAHNPLDSTSPLVKKGKQREVPKAKKPTPLKKASPLIYRCTTFCKTLFQ OMLM01005182.1-41796 agcaccgtaactgaagacaggcagaacaccaagaccatctaattaattc tcaactaccgcttaagaagatcacaaccctaacgcttaggcctgactta tattcgcccctgggaaggagccacgactttggatactcaccattgtgtg SPP00000627_2.0 99 -------------VILREREERKQNRLLEER------DPSRVATEAGEK VIL+EREERKQ RLLEER V AGE+ QCSLVSLFLFYLQVILKEREERKQRRLLEERGVLPESEIQPVDDAAGEE OMLM01005182.1-41649 ctacgattcttccgatagaggaacactcggaggccgagaccgggggggg aggttgttttatatttaagaagaaggttaaggttcagatactaaccgaa acctttatgtttgctgaagaggagatgaggatggtatgcgtgtttaaaa SPP00000627_2.0 129 ETNDNAE DIGVKDSEIEQPASPS + + A +G E++Q QCDTTAT -:D[gat] ELGSPTEELDQLELNG OMLM01005182.1-41502 ctgaagaGGTAAAAA Intron 2 CAGATgcgacaggcgctgtag agacccc <1-----[41480:41375]-1> atggccaataatatag gtcatta gtgttagattggaatc SPP00000627_2.0 152 DDKL----DDGLSENPTLQTEIPNSNPIS---KVPKIHSRKFR +++ D ++N E N++P+ +PKIHSRKFR TNQMKMIEEDEETDNHQETVEQKNTSPVPCPVSLPKIHSRKFR OMLM01005182.1-41324 aacaaaagggggagaccgaggcaaatcgctcgaccaacaaata caatattaaaaacaaaaactaaaaccctcgctgtcataggatg acggagaggtggacccagtaggacaatgccactgcacccaaca SPP00000627_2.0 188 YCNQVLSKDVDECVSNLLKELVR YC+Q+LSKD+DECV+ LLKELVR D:D[gat] YCSQMLSKDIDECVTELLKELVR OMLM01005182.1-41195 GAGTAAGAC Intron 3 CAGTttacacaagaggtgagccagcgc <2-----[41193:41079]-2> aggattgaataagtcattaattg tccgggcacatgtgcaaggggtt SPP00000627_2.0 212 FQDRLYQKDPMKARMKRRLVMGLREVLKHLKLKKVKCVIISPNCERIQS FQDRLYQKDPMKARMKRR+VMGLREVLKHLKL+KVKCVIISPNCERIQS FQDRLYQKDPMKARMKRRIVMGLREVLKHLKLRKVKCVIISPNCERIQS OMLM01005182.1-41008 tcgcctcagcaagcaaacagagcaggcactacaagatgaatcatgcact taagtaaaactacgtaggtttgtgattaatatgatagtttccagagtac cgctgcggccggccgaattaggcagtggcgacggcgtcccacctaacgc SPP00000627_2.0 261 K GLDEALHNIIDTCRDQSVPFVF + GLDEALH II+TCR+Q VPFVF R G:G[ggt] GLDEALHTIIETCREQGVPFVF OMLM01005182.1-40861 aGGTACTGT Intron 4 CAGGTgcgggccaaagatcgcggctgt g <1-----[40857:39924]-1> gtaactacttacggaagtcttt a cgtgtcccctaattagggatgt SPP00000627_2.0 285 ALSRKALGRCVNKAVPVSLVGIFNYDGAQ ALSRKALGRCVNKAVPVSLVGIFNYDGAQ ALSRKALGRCVNKAVPVSLVGIFNYDGAQ OMLM01005182.1-39855 gctaagtgctgaaggcgacggatatgggcGTCAGGT Intron 5 ctcgactgggtaactctgttgttaaagca<0-----[39768:39658] cccaatgtctccgaacctggctcctttag SPP00000627_2.0 314 DHYHKMIELSAEARKSYEVMIANLDEEGE D YHK+IELS+EAR++YEVM+ +L+ G+ DQYHKLIELSSEARRAYEVMVLSLEHTGQ OMLM01005182.1-39660 CAGgctcacagtttggaagtggagtacgcagc -0>aaaaattatccacggcaattttgtaacga cgtcggtggttgcaactaggaacggtacg // Making a V in phase 1 intron Making a D in phase 1 intron Making a D in phase 2 intron Making a G in phase 1 intron >OMLM01005182.1:subseq(0,81986).pep TEKAGGKKSKVPVQLDIGNMLAALEKKQQSQKPKQDTKPVILSVGGGLPVVQKQPSIQKK PPWQQDKIAHNPLDSTSPLVKKGKQREVPKAKKPTPLKKASPLIYRCTTFCKTLFQQCSL VSLFLFYLQVILKEREERKQRRLLEERGVLPESEIQPVDDAAGEEQCDTTATDELGSPTE ELDQLELNGTNQMKMIEEDEETDNHQETVEQKNTSPVPCPVSLPKIHSRKFRDYCSQMLS KDIDECVTELLKELVRFQDRLYQKDPMKARMKRRIVMGLREVLKHLKLRKVKCVIISPNC ERIQSRGGLDEALHTIIETCREQGVPFVFALSRKALGRCVNKAVPVSLVGIFNYDGAQDQ YHKLIELSSEARRAYEVMVLSLEHTGQ // >OMLM01005182.1:subseq(0,81986).[42400:39569].sp ACTGAAAAGGCTGGTGGTAAGAAGAGCAAGGTTCCTGTTCAGCTGGACATAGGAAACATG TTGGCTGCCCTGGAAAAGAAGCAGCAGTCTCAAAAACCCAAGCAGGACACCAAGCCAGTC ATTCTCTCAGTTGGTGGAGGACTTCCTGTTGTCCAGAAACAGCCATCAATTCAGAAGAAG CCCCCTTGGCAGCAAGATAAAATTGCACATAATCCCCTGGACTCCACCAGCCCTTTGGTG AAGAAAGGAAAGCAGAGAGAGGTCCCCAAAGCCAAGAAACCCACTCCTCTTAAGAAGGCA AGTCCACTCATTTACCGATGCACCACATTTTGTAAGACTTTGTTTCAGCAATGCAGCCTT GTTAGTTTATTTCTGTTTTATCTTCAGGTCATTTTGAAAGAAAGGGAAGAGAGGAAACAG AGACGTTTGCTAGAGGAGAGAGGTGTGCTGCCTGAAAGTGAGATCCAGCCTGTGGATGAT GCTGCAGGAGAAGAACAGTGTGACACAACTGCTACAGATGAGCTTGGGAGTCCTACAGAG GAACTTGATCAGTTGGAATTAAATGGCACAAACCAGATGAAAATGATAGAGGAGGATGAG GAGACAGACAACCACCAAGAGACTGTAGAGCAGAAAAACACATCACCTGTGCCCTGCCCA GTCAGTCTGCCCAAAATCCACAGCAGAAAATTCAGAGATTATTGCAGCCAGATGCTGAGC AAAGACATAGATGAGTGTGTGACCGAACTACTGAAGGAGCTGGTTCGTTTCCAGGACCGT CTGTACCAGAAGGACCCCATGAAGGCCCGCATGAAAAGACGTATTGTAATGGGGCTCAGA GAGGTTCTGAAGCACTTGAAACTCAGGAAGGTCAAGTGTGTCATCATCTCACCCAACTGT GAACGAATCCAGTCCAGAGGTGGCCTGGATGAGGCTCTCCACACCATCATTGAAACATGT CGTGAACAGGGGGTGCCATTTGTGTTTGCCCTCTCCAGAAAAGCTTTGGGTCGCTGTGTC AACAAGGCAGTACCCGTCAGTCTGGTGGGCATTTTCAACTATGATGGTGCACAGGACCAG TATCACAAGCTGATTGAGTTGTCTTCTGAGGCCAGAAGAGCCTATGAAGTGATGGTATTA AGCCTGGAGCATACAGGCCAG // OMLM01005182.1:subseq(0,81986) GeneWise match 42400 39571 476.30 - . OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise cds 42400 42271 0.00 - 0 OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise intron 42270 41868 0.00 - . OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise cds 41867 41481 0.00 - 2 OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise intron 41480 41375 0.00 - . OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise cds 41374 41194 0.00 - 2 OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise intron 41193 41079 0.00 - . OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise cds 41078 40858 0.00 - 1 OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise intron 40857 39924 0.00 - . OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise cds 39923 39769 0.00 - 2 OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise intron 39768 39658 0.00 - . OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 OMLM01005182.1:subseq(0,81986) GeneWise cds 39657 39571 0.00 - 0 OMLM01005182.1:subseq(0,81986)-genewise-prediction-1 //